From Lab to the World

Course materials for Michael Dunn's course at the 2018 LOT Winter School

Lecture outline and readings

Software requirements

Exercise 1: Bayesian Phylogenetic Inference with MrBayes
Datafile: Aslian28.nex

Exercise 2: Constraints and multiple partitions
Datafiles: new-britain-swadesh.nex, new-britain-structural.nex

Exercise 3: Ancestral State Reconstruction and the DISCRETE test
Datafiles: Aslian28+structure1.nex, Aslian28.nex.trees, Aslian-complexity.txt, Aslian-semantics.txt

Software requirements

Optional tools